Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | EJD96_RS08205 | Not Available | + | 1795756 - 1797324 | 55466.6 |
| ggdef and eal domain-containing protein | EJD96_RS08210 | Not Available | + | 1797329 - 1799125 | 66955.8 |
| gaf domain-containing protein | EJD96_RS08215 | Not Available | - | 1799152 - 1799826 | 24437.4 |
| duf1289 domain-containing protein | EJD96_RS08220 | Not Available | + | 1800370 - 1800546 | 6798.53 |
| mfs transporter | EJD96_RS08225 | Not Available | + | 1800720 - 1802054 | 47253.2 |
| duf4197 domain-containing protein | EJD96_RS08230 | Not Available | + | 1802114 - 1802812 | 24248.4 |
| abc transporter permease | EJD96_RS08235 | Not Available | + | 1803395 - 1804108 | 24967.4 |
| glycine betaine abc transporter substrate-binding protein | EJD96_RS08240 | Not Available | + | 1804196 - 1805116 | 33950.6 |
| abc transporter permease | EJD96_RS08245 | Not Available | + | 1805127 - 1805777 | 22931.7 |
| abc transporter atp-binding protein | EJD96_RS08250 | Not Available | + | 1805774 - 1806907 | 41629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.