Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EJD96_RS08110 | Not Available | + | 1776682 - 1777860 | 41905.5 |
| hypothetical protein | EJD96_RS24395 | Not Available | + | 1777927 - 1778061 | 4895.09 |
| hypothetical protein | EJD96_RS08115 | Not Available | + | 1778165 - 1778569 | 14747.8 |
| hypothetical protein | EJD96_RS08120 | Not Available | + | 1778684 - 1778938 | 9178.91 |
| gaf domain-containing protein | EJD96_RS08125 | Not Available | - | 1778972 - 1779682 | 26337.5 |
| hypothetical protein | EJD96_RS08130 | Not Available | + | 1779793 - 1780149 | 12818.7 |
| hypothetical protein | EJD96_RS08135 | Not Available | - | 1780301 - 1780612 | 12103.6 |
| hypothetical protein | EJD96_RS08140 | Not Available | - | 1780657 - 1781019 | 13074.7 |
| response regulator | EJD96_RS08145 | Not Available | - | 1781280 - 1781684 | 14894.3 |
| methyl-accepting chemotaxis protein | EJD96_RS08150 | Not Available | + | 1782181 - 1784112 | 66131.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.