Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EJD96_RS08060 | Not Available | + | 1764070 - 1764891 | 30197.7 |
| methyl-accepting chemotaxis protein | EJD96_RS08065 | Not Available | + | 1765046 - 1766698 | 58575.8 |
| d-amino acid dehydrogenase | EJD96_RS08070 | Not Available | - | 1766781 - 1768082 | 46519.1 |
| lrp/asnc ligand binding domain-containing protein | EJD96_RS08075 | Not Available | + | 1768264 - 1768752 | 18517.7 |
| fdhf/ydep family oxidoreductase | EJD96_RS08080 | Not Available | + | 1768930 - 1771257 | 85859.6 |
| helix-turn-helix domain-containing protein | EJD96_RS08085 | Not Available | + | 1771270 - 1771554 | 10106.2 |
| plp-dependent aminotransferase family protein | EJD96_RS08090 | Not Available | - | 1771723 - 1773165 | 53797.6 |
| glutathione s-transferase family protein | EJD96_RS08095 | Not Available | + | 1773224 - 1773895 | 25386.0 |
| hemolysin family protein | EJD96_RS08100 | Not Available | + | 1774023 - 1775351 | 49583.9 |
| gaf domain-containing protein | EJD96_RS08105 | Not Available | + | 1776020 - 1776463 | 16819.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.