Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | EJD96_RS08010 | Not Available | + | 1753842 - 1755446 | 58857.6 |
| cytochrome c | EJD96_RS08015 | Not Available | + | 1755439 - 1756800 | 48342.2 |
| abc transporter substrate-binding protein | EJD96_RS08020 | Not Available | + | 1756969 - 1757808 | 30368.8 |
| flxa-like family protein | EJD96_RS08025 | Not Available | - | 1757991 - 1758335 | 12723.2 |
| 4-hydroxyphenylpyruvate dioxygenase | EJD96_RS08030 | Not Available | - | 1758484 - 1759578 | 40222.9 |
| lrp/asnc family transcriptional regulator | EJD96_RS08035 | Not Available | + | 1759726 - 1760244 | 19377.5 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EJD96_RS08040 | Not Available | + | 1760336 - 1761454 | 40075.5 |
| alpha/beta hydrolase | EJD96_RS08045 | Not Available | + | 1761508 - 1762416 | 31973.0 |
| dna oxidative demethylase alkb | EJD96_RS08050 | Not Available | + | 1762413 - 1763066 | 23762.5 |
| dmt family transporter | EJD96_RS08055 | Not Available | - | 1763020 - 1763955 | 33202.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.