Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphodiester glycosidase family protein | EJD96_RS07960 | Not Available | - | 1742916 - 1743695 | 28595.5 |
| branched-chain amino acid abc transporter substrate-binding protein | EJD96_RS07965 | Not Available | + | 1744129 - 1745250 | 39088.1 |
| high-affinity branched-chain amino acid abc transporter permease livh | EJD96_RS07970 | Not Available | + | 1745349 - 1746275 | 32342.0 |
| high-affinity branched-chain amino acid abc transporter permease livm | EJD96_RS07975 | Not Available | + | 1746328 - 1747554 | 44257.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | EJD96_RS07980 | Not Available | + | 1747551 - 1748327 | 28504.7 |
| abc transporter atp-binding protein | EJD96_RS07985 | Not Available | + | 1748327 - 1749031 | 25340.0 |
| duf3274 domain-containing protein | EJD96_RS07990 | Not Available | + | 1749229 - 1751406 | 80213.8 |
| hypothetical protein | EJD96_RS07995 | Not Available | + | 1751403 - 1752893 | 55728.7 |
| hypothetical protein | EJD96_RS24055 | Not Available | + | 1752901 - 1753098 | 6974.46 |
| sorbitol dehydrogenase family protein | EJD96_RS08005 | Not Available | + | 1753320 - 1753823 | 17883.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.