Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | EJD96_RS07860 | Not Available | - | 1724886 - 1725686 | 30167.1 |
| class i sam-dependent methyltransferase | EJD96_RS07865 | Not Available | + | 1725818 - 1726579 | 27510.0 |
| d-alanyl-d-alanine endopeptidase | EJD96_RS07870 | Not Available | + | 1727009 - 1728109 | 39655.2 |
| iclr family transcriptional regulator | EJD96_RS07875 | Not Available | - | 1728351 - 1729136 | 28808.6 |
| sulfate abc transporter substrate-binding protein | EJD96_RS07880 | Not Available | + | 1729413 - 1730426 | 37065.1 |
| nadph-dependent fmn reductase | EJD96_RS07885 | Not Available | + | 1730488 - 1731084 | 21319.7 |
| sulfonate abc transporter substrate-binding protein | EJD96_RS07890 | Not Available | + | 1731194 - 1732177 | 35394.8 |
| fmnh2-dependent alkanesulfonate monooxygenase | EJD96_RS07895 | Not Available | + | 1732199 - 1733365 | 42052.0 |
| aliphatic sulfonate abc transporter permease ssuc | EJD96_RS07900 | Not Available | + | 1733373 - 1734212 | 30361.6 |
| atp-binding cassette domain-containing protein | EJD96_RS07905 | Not Available | + | 1734243 - 1735076 | 30242.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.