Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa-binding protein | EJD96_RS07810 | Not Available | - | 1716343 - 1716600 | 9503.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EJD96_RS07815 | Not Available | - | 1716619 - 1716975 | 12232.4 |
| beta-propeller fold lactonase family protein | EJD96_RS07820 | Not Available | + | 1717287 - 1718270 | 35862.5 |
| polysaccharide deacetylase family protein | EJD96_RS07825 | Not Available | + | 1718302 - 1719123 | 30549.7 |
| sterol desaturase family protein | EJD96_RS07830 | Not Available | + | 1719228 - 1720214 | 37772.1 |
| ei24 domain-containing protein | EJD96_RS07835 | Not Available | + | 1720214 - 1721056 | 31335.6 |
| competence/damage-inducible protein a | EJD96_RS07840 | Not Available | + | 1721168 - 1721974 | 29785.6 |
| phasin family protein | EJD96_RS07845 | Not Available | - | 1722082 - 1722645 | 19800.3 |
| histone deacetylase | EJD96_RS07850 | Not Available | + | 1723084 - 1723974 | 31896.8 |
| dmt family transporter | EJD96_RS07855 | Not Available | + | 1723971 - 1724870 | 31797.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.