Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | EJD96_RS07760 | Not Available | + | 1704701 - 1705885 | 42580.2 |
| endonuclease iii | EJD96_RS07765 | Not Available | - | 1705895 - 1706545 | 24375.6 |
| electron transport complex subunit rsxb | EJD96_RS07770 | Not Available | - | 1706542 - 1707264 | 25689.6 |
| polyhydroxyalkanoate depolymerase | EJD96_RS07775 | Not Available | - | 1707394 - 1708629 | 46563.6 |
| nad(p)/fad-dependent oxidoreductase | EJD96_RS07780 | Not Available | - | 1708926 - 1709999 | 38939.3 |
| ferredoxin fdxa | EJD96_RS07785 | Not Available | - | 1710287 - 1710610 | 12103.2 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS07790 | Not Available | + | 1711056 - 1712245 | 42471.1 |
| nicotinate phosphoribosyltransferase | EJD96_RS07795 | Not Available | + | 1712403 - 1713578 | 45369.4 |
| sodium:proton antiporter | EJD96_RS07800 | Not Available | + | 1713711 - 1715141 | 50950.5 |
| 2-hydroxyacid dehydrogenase | EJD96_RS07805 | Not Available | + | 1715244 - 1716224 | 35191.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.