Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy-metal-associated domain-containing protein | EJD96_RS07710 | Not Available | + | 1696985 - 1697185 | 6958.22 |
| vwa domain-containing protein | EJD96_RS07715 | Not Available | - | 1697303 - 1698472 | 45337.2 |
| gnat family n-acetyltransferase | EJD96_RS07720 | Not Available | - | 1698483 - 1699070 | 22475.3 |
| aaa family atpase | EJD96_RS07725 | Not Available | - | 1699103 - 1699978 | 33382.2 |
| site-specific recombinase | EJD96_RS07730 | Not Available | + | 1700177 - 1702414 | 82487.6 |
| c-type cytochrome | EJD96_RS07735 | Not Available | + | 1702779 - 1703099 | 11181.5 |
| c-type cytochrome | EJD96_RS07740 | Not Available | + | 1703114 - 1703467 | 12473.9 |
| hypothetical protein | EJD96_RS07745 | Not Available | + | 1703565 - 1703801 | 9230.01 |
| hypothetical protein | EJD96_RS24455 | Not Available | + | 1703904 - 1704083 | 6298.46 |
| duf1841 family protein | EJD96_RS07755 | Not Available | - | 1704061 - 1704492 | 16426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.