Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EJD96_RS07565 | Not Available | + | 1661277 - 1662284 | 36837.6 |
| abc transporter substrate-binding protein | EJD96_RS07570 | Not Available | + | 1662526 - 1664112 | 57881.9 |
| acyl-coa thioesterase/baat n-terminal domain-containing protein | EJD96_RS07575 | Not Available | + | 1664117 - 1665448 | 47880.7 |
| cmd domain protein | EJD96_RS07580 | Not Available | + | 1665445 - 1665966 | 18286.1 |
| peroxidase-related enzyme | EJD96_RS07585 | Not Available | + | 1665977 - 1666582 | 22114.2 |
| glycine cleavage system protein gcvh | EJD96_RS07590 | Not Available | + | 1666640 - 1667017 | 13475.0 |
| fmnh2-dependent alkanesulfonate monooxygenase | EJD96_RS07595 | Not Available | - | 1667031 - 1668158 | 40820.6 |
| lysr substrate-binding domain-containing protein | EJD96_RS07600 | Not Available | - | 1669153 - 1670055 | 33360.4 |
| mfs transporter | EJD96_RS07605 | Not Available | + | 1670132 - 1671283 | 40486.5 |
| hypothetical protein | EJD96_RS24045 | Not Available | + | 1671402 - 1671557 | 5561.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.