Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | EJD96_RS07465 | Not Available | + | 1640356 - 1642338 | 72578.7 |
| Trna-ser | Not Available | Not Available | + | 1642519 - 1642609 | Not Available |
| hypothetical protein | EJD96_RS07475 | Not Available | - | 1643096 - 1643353 | 9078.34 |
| marr family winged helix-turn-helix transcriptional regulator | EJD96_RS07480 | Not Available | - | 1643467 - 1643901 | 16307.8 |
| voc family protein | EJD96_RS07485 | Not Available | + | 1644078 - 1644623 | 20816.7 |
| fad-dependent oxidoreductase | EJD96_RS07490 | Not Available | + | 1644687 - 1646330 | 61033.9 |
| hypothetical protein | EJD96_RS07495 | Not Available | - | 1646434 - 1646664 | 8688.29 |
| response regulator | EJD96_RS07500 | Not Available | - | 1646680 - 1647081 | 14733.1 |
| methyl-accepting chemotaxis protein | EJD96_RS07505 | Not Available | + | 1647934 - 1649505 | 55260.1 |
| hypothetical protein | EJD96_RS07510 | Not Available | - | 1649718 - 1649936 | 7992.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.