Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translocation/assembly module tamb domain-containing protein | EJD96_RS07415 | Not Available | - | 1627183 - 1631223 | 142839.0 |
| autotransporter assembly complex protein tama | EJD96_RS07420 | Not Available | - | 1631341 - 1633107 | 65130.6 |
| ferredoxin--nadp reductase | EJD96_RS07425 | Not Available | + | 1633389 - 1634198 | 29946.7 |
| response regulator transcription factor | EJD96_RS07430 | Not Available | + | 1634565 - 1635230 | 24618.8 |
| winged helix-turn-helix transcriptional regulator | EJD96_RS07435 | Not Available | - | 1635283 - 1635621 | 12922.8 |
| glutathione transferase gsta | EJD96_RS07440 | Not Available | + | 1635809 - 1636438 | 24015.8 |
| Trna-his | Not Available | Not Available | + | 1636613 - 1636688 | Not Available |
| glutamate racemase | EJD96_RS07450 | Not Available | - | 1636817 - 1637710 | 31797.4 |
| fumarate hydratase | EJD96_RS07455 | Not Available | - | 1637747 - 1639288 | 55549.3 |
| yqha family protein | EJD96_RS07460 | Not Available | - | 1639328 - 1639969 | 23374.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.