Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EJD96_RS07365 | Not Available | + | 1614433 - 1615836 | 50104.2 |
| dmt family transporter | EJD96_RS07370 | Not Available | + | 1615858 - 1616754 | 32406.3 |
| magnesium and cobalt transport protein cora | EJD96_RS07375 | Not Available | + | 1616801 - 1617787 | 37549.6 |
| tonb-dependent siderophore receptor | EJD96_RS07380 | Not Available | + | 1618052 - 1620163 | 76665.5 |
| abc transporter substrate-binding protein | EJD96_RS07385 | Not Available | + | 1620166 - 1621782 | 58162.1 |
| abc transporter permease | EJD96_RS07390 | Not Available | + | 1621773 - 1622747 | 34467.3 |
| abc transporter permease | EJD96_RS07395 | Not Available | + | 1622744 - 1623580 | 29356.0 |
| abc transporter atp-binding protein | EJD96_RS07400 | Not Available | + | 1623577 - 1625052 | 52156.2 |
| hypothetical protein | EJD96_RS07405 | Not Available | - | 1625064 - 1625420 | 13455.9 |
| sensor domain-containing diguanylate cyclase | EJD96_RS07410 | Not Available | - | 1625424 - 1627049 | 59654.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.