Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper family protein | EJD96_RS07315 | Not Available | + | 1597624 - 1598187 | 18921.2 |
| tryptophan--trna ligase | EJD96_RS07320 | Not Available | + | 1598458 - 1599492 | 37791.3 |
| atp-binding protein | EJD96_RS07325 | Not Available | - | 1599571 - 1600962 | 50959.9 |
| response regulator | EJD96_RS07330 | Not Available | - | 1600959 - 1601696 | 27345.9 |
| spy/cpxp family protein refolding chaperone | EJD96_RS07335 | Not Available | + | 1601933 - 1602472 | 20180.2 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | EJD96_RS07340 | Not Available | + | 1602867 - 1604417 | 54986.5 |
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | EJD96_RS07345 | Not Available | + | 1604430 - 1607576 | 112289.0 |
| efflux rnd transporter permease subunit | EJD96_RS07350 | Not Available | + | 1607589 - 1610825 | 115757.0 |
| efflux transporter outer membrane subunit | EJD96_RS07355 | Not Available | + | 1610848 - 1612371 | 53214.7 |
| chorismate-binding protein | EJD96_RS07360 | Not Available | - | 1612436 - 1614283 | 66635.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.