Herbaspirillum seropedicae str. AU13965

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum seropedicae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum seropedicae str. AU13965

Accession NumberNZ_CP034395.1

Gene Summary

Adenine Count

988071 bp

Thymine Count

984583 bp

Guanine Count

1688182 bp

Cytosine Count

1689162 bp

Genome Length

5349998 bp

Protein-coding Genes

4674 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
30s ribosomal protein s16EJD96_RS07265Not Available+1589781 - 15900359138.02
ribosome maturation factor rimmEJD96_RS07270Not Available+1590107 - 159072122113.1
trna (guanosine(37)-n1)-methyltransferase trmdEJD96_RS07275Not Available+1590806 - 159157928395.1
50s ribosomal protein l19EJD96_RS07280Not Available+1591734 - 159211714254.2
coa pyrophosphataseEJD96_RS07285Not Available+1592224 - 159289525015.8
cobd/cbib family proteinEJD96_RS07290Not Available+1593069 - 159402835341.8
duf3579 domain-containing proteinEJD96_RS07295Not Available+1594353 - 159470312762.2
class ii fumarate hydrataseEJD96_RS07300Not Available+1594928 - 159631649359.3
hypothetical proteinEJD96_RS07305Not Available-1596436 - 159687315846.2
hypothetical proteinEJD96_RS07310Not Available+1597221 - 159754711787.2

Displaying genes 1431 – 1440 of 4765 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites