Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | EJD96_RS07215 | Not Available | + | 1580283 - 1580978 | 25550.2 |
| amino acid abc transporter permease | EJD96_RS07220 | Not Available | + | 1580978 - 1581628 | 23910.0 |
| amino acid abc transporter atp-binding protein | EJD96_RS07225 | Not Available | + | 1581615 - 1582349 | 27097.0 |
| sugar phosphate isomerase/epimerase family protein | EJD96_RS07230 | Not Available | + | 1582346 - 1583089 | 27021.5 |
| sugar kinase | EJD96_RS07235 | Not Available | + | 1583101 - 1584042 | 33429.3 |
| 2-hydroxyacid dehydrogenase | EJD96_RS07240 | Not Available | + | 1584207 - 1585166 | 34505.2 |
| electron transfer flavoprotein subunit beta/fixa family protein | EJD96_RS07245 | Not Available | + | 1585388 - 1586143 | 26905.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EJD96_RS07250 | Not Available | + | 1586146 - 1587075 | 31553.7 |
| acyl-coa dehydrogenase | EJD96_RS07255 | Not Available | + | 1587171 - 1588955 | 63326.8 |
| nine protein | EJD96_RS07260 | Not Available | - | 1589045 - 1589467 | 15015.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.