Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EJD96_RS07165 | Not Available | - | 1569196 - 1570008 | 29460.4 |
| nuclear transport factor 2 family protein | EJD96_RS07170 | Not Available | - | 1570054 - 1570617 | 21369.4 |
| abc transporter permease | EJD96_RS07175 | Not Available | - | 1570735 - 1571553 | 29356.6 |
| abc transporter atp-binding protein | EJD96_RS07180 | Not Available | - | 1571550 - 1572347 | 28708.7 |
| abc transporter substrate-binding protein | EJD96_RS07185 | Not Available | - | 1572351 - 1573310 | 33940.2 |
| acyl-coa dehydrogenase family protein | EJD96_RS07190 | Not Available | - | 1573426 - 1574610 | 42676.2 |
| mchs3 family protein | EJD96_RS07195 | Not Available | - | 1575028 - 1575432 | 14691.5 |
| tonb-dependent siderophore receptor | EJD96_RS07200 | Not Available | - | 1575555 - 1577696 | 77188.0 |
| laci family dna-binding transcriptional regulator | EJD96_RS07205 | Not Available | + | 1577957 - 1579057 | 39593.0 |
| transporter substrate-binding domain-containing protein | EJD96_RS07210 | Not Available | + | 1579365 - 1580168 | 28423.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.