Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | EJD96_RS07115 | Not Available | - | 1556619 - 1557686 | 39091.1 |
| ofa family mfs transporter | EJD96_RS07120 | Not Available | + | 1557911 - 1559557 | 58366.7 |
| formate dehydrogenase subunit gamma | EJD96_RS07125 | Not Available | + | 1560080 - 1560556 | 17122.7 |
| formate dehydrogenase beta subunit | EJD96_RS07130 | Not Available | + | 1560556 - 1562118 | 55144.3 |
| formate dehydrogenase subunit alpha | EJD96_RS07135 | Not Available | + | 1562149 - 1565022 | 105154.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EJD96_RS07140 | Not Available | + | 1565096 - 1565938 | 30224.9 |
| formate dehydrogenase subunit delta | EJD96_RS07145 | Not Available | + | 1566006 - 1566233 | 8631.48 |
| flavin reductase | EJD96_RS07150 | Not Available | - | 1566460 - 1566960 | 17512.3 |
| lysr family transcriptional regulator | EJD96_RS07155 | Not Available | + | 1567177 - 1568112 | 35100.8 |
| nadp-dependent oxidoreductase | EJD96_RS07160 | Not Available | + | 1568202 - 1569131 | 32828.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.