Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | EJD96_RS07060 | Not Available | - | 1546395 - 1547183 | 27455.4 |
| lysr family transcriptional regulator | EJD96_RS07065 | Not Available | + | 1547286 - 1548194 | 32893.8 |
| hypothetical protein | EJD96_RS07070 | Not Available | - | 1548717 - 1549604 | 33341.0 |
| duf2515 family protein | EJD96_RS07075 | Not Available | - | 1549601 - 1550605 | 38655.2 |
| Trna-leu | Not Available | Not Available | + | 1551122 - 1551206 | Not Available |
| surface-adhesin e family protein | EJD96_RS07085 | Not Available | - | 1551285 - 1551680 | 14222.1 |
| tartrate dehydrogenase | EJD96_RS07095 | Not Available | - | 1552025 - 1553104 | 39482.2 |
| d-hexose-6-phosphate mutarotase | EJD96_RS07100 | Not Available | - | 1553339 - 1554277 | 35032.8 |
| lysr family transcriptional regulator | EJD96_RS07105 | Not Available | + | 1554449 - 1555363 | 34028.6 |
| lysr substrate-binding domain-containing protein | EJD96_RS07110 | Not Available | - | 1555588 - 1556499 | 32890.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.