Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | EJD96_RS06960 | Not Available | - | 1516689 - 1518122 | 51341.0 |
| yihy/virulence factor brkb family protein | EJD96_RS06965 | Not Available | + | 1518424 - 1519809 | 49800.9 |
| fdhf/ydep family oxidoreductase | EJD96_RS06970 | Not Available | + | 1519977 - 1522298 | 85821.4 |
| helix-turn-helix domain-containing protein | EJD96_RS06975 | Not Available | + | 1522422 - 1522754 | 12295.7 |
| asparaginase | EJD96_RS06980 | Not Available | - | 1522923 - 1523993 | 38228.8 |
| ggdef domain-containing protein | EJD96_RS06985 | Not Available | - | 1524309 - 1525388 | 41551.5 |
| lipid a hydroxylase lpxo | EJD96_RS06990 | Not Available | - | 1525890 - 1526789 | 34591.9 |
| d-amino acid dehydrogenase | EJD96_RS06995 | Not Available | - | 1527140 - 1528450 | 47891.1 |
| hypothetical protein | EJD96_RS07000 | Not Available | - | 1528643 - 1529083 | 15867.8 |
| dna polymerase iii subunit chi | EJD96_RS07005 | Not Available | - | 1529114 - 1529533 | 15631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.