Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | EJD96_RS06910 | Not Available | - | 1504101 - 1505015 | 34583.0 |
| tonb-dependent receptor | EJD96_RS06915 | Not Available | + | 1505352 - 1507505 | 79168.6 |
| ribosome small subunit-dependent gtpase a | EJD96_RS06920 | Not Available | - | 1507522 - 1508457 | 34125.8 |
| 4a-hydroxytetrahydrobiopterin dehydratase | EJD96_RS06925 | Not Available | - | 1508457 - 1508813 | 12741.0 |
| m48 family metallopeptidase | EJD96_RS06930 | Not Available | - | 1508884 - 1510164 | 46992.1 |
| oligoribonuclease | EJD96_RS06935 | Not Available | + | 1510305 - 1510874 | 21535.0 |
| upf0149 family protein | EJD96_RS06940 | Not Available | - | 1510970 - 1511671 | 26654.4 |
| serine/threonine protein kinase | EJD96_RS06945 | Not Available | + | 1511797 - 1512807 | 38314.4 |
| dna-3-methyladenine glycosylase i | EJD96_RS06950 | Not Available | + | 1512829 - 1513398 | 21355.3 |
| ftsk/spoiiie family dna translocase | EJD96_RS06955 | Not Available | + | 1513563 - 1516541 | 105482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.