Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EJD96_RS06860 | Not Available | + | 1488343 - 1489071 | 27845.7 |
| bifunctional | EJD96_RS06865 | Not Available | - | 1489178 - 1491904 | 101731.0 |
| yhdp family protein | EJD96_RS06870 | Not Available | + | 1492207 - 1496526 | 156239.0 |
| carbon-nitrogen hydrolase family protein | EJD96_RS06875 | Not Available | + | 1496614 - 1497420 | 29886.9 |
| metalloprotease tldd | EJD96_RS06880 | Not Available | + | 1497446 - 1498906 | 51485.6 |
| 3-deoxy-7-phosphoheptulonate synthase arog | EJD96_RS06885 | Not Available | + | 1499452 - 1500525 | 39139.8 |
| yajq family cyclic di-gmp-binding protein | EJD96_RS06890 | Not Available | - | 1500604 - 1501089 | 18217.8 |
| udp-n-acetylmuramate dehydrogenase | EJD96_RS06895 | Not Available | + | 1501225 - 1502256 | 37073.6 |
| pyrimidine/purine nucleoside phosphorylase | EJD96_RS06900 | Not Available | - | 1502343 - 1502657 | 11219.3 |
| argininosuccinate synthase | EJD96_RS06905 | Not Available | - | 1502695 - 1504029 | 49541.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.