Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | EJD96_RS06810 | Not Available | - | 1476552 - 1477247 | 24790.1 |
| abc transporter permease | EJD96_RS06815 | Not Available | - | 1477273 - 1478193 | 31957.6 |
| abc transporter permease | EJD96_RS06820 | Not Available | - | 1478186 - 1479334 | 39196.3 |
| bmp family abc transporter substrate-binding protein | EJD96_RS06825 | Not Available | - | 1479363 - 1480460 | 39277.8 |
| allophanate hydrolase | EJD96_RS06830 | Not Available | - | 1480605 - 1482440 | 64316.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | EJD96_RS06835 | Not Available | - | 1482727 - 1483452 | 26203.6 |
| transketolase | EJD96_RS06840 | Not Available | + | 1483647 - 1485647 | 71597.2 |
| gnat family n-acetyltransferase | EJD96_RS06845 | Not Available | + | 1485662 - 1486189 | 18985.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EJD96_RS06850 | Not Available | + | 1486393 - 1487406 | 35986.8 |
| hypothetical protein | EJD96_RS06855 | Not Available | + | 1487644 - 1488162 | 18598.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.