Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | EJD96_RS06760 | Not Available | - | 1465559 - 1466656 | 39169.2 |
| dutp diphosphatase | EJD96_RS06765 | Not Available | - | 1466668 - 1467117 | 15844.3 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EJD96_RS06770 | Not Available | - | 1467191 - 1468387 | 42516.6 |
| signal peptidase ii | EJD96_RS06775 | Not Available | - | 1468419 - 1468934 | 18713.1 |
| isoleucine--trna ligase | EJD96_RS06780 | Not Available | - | 1469009 - 1471903 | 107713.0 |
| bifunctional riboflavin kinase/fad synthetase | EJD96_RS06785 | Not Available | - | 1472027 - 1473004 | 35293.7 |
| gntr family transcriptional regulator | EJD96_RS06790 | Not Available | - | 1473186 - 1473890 | 26910.5 |
| oxalurate catabolism protein hpxz | EJD96_RS06795 | Not Available | - | 1473927 - 1474304 | 14388.2 |
| cysteine hydrolase family protein | EJD96_RS06800 | Not Available | - | 1474301 - 1474984 | 24498.7 |
| abc transporter atp-binding protein | EJD96_RS06805 | Not Available | - | 1474981 - 1476549 | 56687.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.