Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sirb1 family protein | EJD96_RS06715 | Not Available | - | 1455743 - 1456591 | 32230.7 |
| murein biosynthesis integral membrane protein murj | EJD96_RS06720 | Not Available | - | 1456703 - 1458256 | 56308.0 |
| 30s ribosomal protein s20 | EJD96_RS06725 | Not Available | + | 1458587 - 1458853 | 9319.27 |
| duf192 domain-containing protein | EJD96_RS06730 | Not Available | - | 1459023 - 1459487 | 17345.3 |
| hypothetical protein | EJD96_RS24040 | Not Available | - | 1459634 - 1459804 | 5629.12 |
| pseudouridine synthase | EJD96_RS06735 | Not Available | - | 1459997 - 1460563 | 21217.7 |
| nadp-dependent isocitrate dehydrogenase | EJD96_RS06740 | Not Available | + | 1460826 - 1462082 | 45784.4 |
| cold-shock protein | EJD96_RS06745 | Not Available | - | 1462232 - 1462438 | 7354.6 |
| atp-dependent clp protease adapter clps | EJD96_RS06750 | Not Available | + | 1462777 - 1463091 | 11774.3 |
| atp-dependent clp protease atp-binding subunit clpa | EJD96_RS06755 | Not Available | + | 1463088 - 1465391 | 84717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.