Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome assembly rna-binding protein yhby | EJD96_RS06665 | Not Available | - | 1441753 - 1442211 | 16418.3 |
| rlme family rna methyltransferase | EJD96_RS06670 | Not Available | + | 1442288 - 1442935 | 23912.1 |
| atp-dependent zinc metalloprotease ftsh | EJD96_RS06675 | Not Available | + | 1443272 - 1445161 | 69588.7 |
| dihydropteroate synthase | EJD96_RS06680 | Not Available | + | 1445326 - 1446174 | 30854.7 |
| phosphoglucosamine mutase | EJD96_RS06685 | Not Available | + | 1446291 - 1447625 | 47375.4 |
| response regulator | EJD96_RS06690 | Not Available | + | 1447668 - 1448360 | 26037.7 |
| c-type cytochrome | EJD96_RS06695 | Not Available | - | 1448459 - 1449754 | 45860.3 |
| c-type cytochrome | EJD96_RS06700 | Not Available | - | 1449751 - 1450446 | 24348.9 |
| penicillin-binding protein 1a | EJD96_RS06705 | Not Available | - | 1451018 - 1453486 | 89712.2 |
| atp-binding cassette domain-containing protein | EJD96_RS06710 | Not Available | + | 1453805 - 1455727 | 71001.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.