Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | EJD96_RS06570 | Not Available | + | 1417937 - 1419682 | 61513.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EJD96_RS06575 | Not Available | + | 1419720 - 1421510 | 66097.8 |
| hypothetical protein | EJD96_RS06580 | Not Available | + | 1421664 - 1421831 | 6307.38 |
| atp-binding protein | EJD96_RS06585 | Not Available | - | 1421867 - 1424626 | 100577.0 |
| response regulator | EJD96_RS06590 | Not Available | - | 1424636 - 1425424 | 28956.0 |
| response regulator transcription factor | EJD96_RS06595 | Not Available | + | 1425910 - 1426575 | 24608.4 |
| dihydrodipicolinate synthase family protein | EJD96_RS06600 | Not Available | - | 1426711 - 1427631 | 33360.3 |
| lysr family transcriptional regulator | EJD96_RS06605 | Not Available | + | 1427754 - 1428698 | 33835.6 |
| transcriptional regulator nanr | EJD96_RS06610 | Not Available | + | 1428777 - 1429484 | 26516.9 |
| helix-turn-helix transcriptional regulator | EJD96_RS06615 | Not Available | - | 1429528 - 1430199 | 24463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.