Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS24390 | Not Available | - | 1393531 - 1393653 | 4099.99 |
| lysr family transcriptional regulator | EJD96_RS06475 | Not Available | + | 1393874 - 1394803 | 34991.3 |
| porin | EJD96_RS06480 | Not Available | - | 1394852 - 1395910 | 36607.9 |
| atp-binding protein | EJD96_RS06485 | Not Available | - | 1396246 - 1397772 | 57714.4 |
| acyl-coa dehydrogenase family protein | EJD96_RS06490 | Not Available | + | 1397924 - 1399084 | 40892.1 |
| hypothetical protein | EJD96_RS06495 | Not Available | + | 1399156 - 1399527 | 13607.5 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS06500 | Not Available | + | 1399530 - 1400273 | 25355.8 |
| abc transporter substrate-binding protein | EJD96_RS06505 | Not Available | + | 1400367 - 1401521 | 40817.7 |
| branched-chain amino acid abc transporter permease | EJD96_RS06510 | Not Available | + | 1401663 - 1402697 | 36796.8 |
| abc transporter permease subunit | EJD96_RS06515 | Not Available | + | 1402694 - 1404577 | 66933.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.