Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EJD96_RS06425 | Not Available | + | 1383042 - 1384358 | 46978.6 |
| transcriptional regulator | EJD96_RS06430 | Not Available | + | 1384587 - 1384775 | 6971.41 |
| ntp transferase domain-containing protein | EJD96_RS06435 | Not Available | - | 1384843 - 1385463 | 21595.5 |
| methyl-accepting chemotaxis protein | EJD96_RS06440 | Not Available | + | 1386132 - 1387679 | 54562.4 |
| response regulator transcription factor | EJD96_RS06445 | Not Available | - | 1387756 - 1388400 | 24029.3 |
| 4-hydroxyphenylacetate 3-monooxygenase, reductase component | EJD96_RS06450 | Not Available | + | 1388714 - 1389286 | 20825.1 |
| pdr/vanb family oxidoreductase | EJD96_RS06455 | Not Available | - | 1389493 - 1390449 | 34074.0 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | EJD96_RS06460 | Not Available | - | 1390505 - 1391005 | 18851.6 |
| aromatic ring-hydroxylating oxygenase subunit alpha | EJD96_RS06465 | Not Available | - | 1391011 - 1392297 | 48598.5 |
| amidase family protein | EJD96_RS06470 | Not Available | - | 1392368 - 1393534 | 39320.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.