Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EJD96_RS06375 | Not Available | + | 1370936 - 1371769 | 30153.8 |
| 2,5-dihydroxypyridine 5,6-dioxygenase | EJD96_RS06380 | Not Available | + | 1371809 - 1372864 | 38362.9 |
| n-carbamoylsarcosine amidohydrolase | EJD96_RS06385 | Not Available | + | 1372909 - 1373532 | 22401.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | EJD96_RS06390 | Not Available | + | 1373593 - 1375872 | 81766.3 |
| marr family winged helix-turn-helix transcriptional regulator | EJD96_RS06395 | Not Available | - | 1375896 - 1376336 | 16246.7 |
| flavin reductase family protein | EJD96_RS06400 | Not Available | + | 1376555 - 1377169 | 22074.7 |
| methyl-accepting chemotaxis protein | EJD96_RS06405 | Not Available | + | 1377647 - 1379257 | 56932.2 |
| porin | EJD96_RS06410 | Not Available | + | 1379350 - 1380390 | 36262.4 |
| xdhc family protein | EJD96_RS06415 | Not Available | + | 1380421 - 1381458 | 36712.5 |
| fad-dependent monooxygenase | EJD96_RS06420 | Not Available | + | 1381750 - 1382904 | 42721.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.