Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| benzoate/h(+) symporter bene family transporter | EJD96_RS06325 | Not Available | + | 1359510 - 1360679 | 40271.5 |
| gtpase | EJD96_RS06330 | Not Available | + | 1360698 - 1361966 | 46657.5 |
| dynamin family protein | EJD96_RS06335 | Not Available | + | 1361963 - 1363501 | 55409.2 |
| hypothetical protein | EJD96_RS06340 | Not Available | + | 1363681 - 1364094 | 14533.4 |
| duf5666 domain-containing protein | EJD96_RS06345 | Not Available | + | 1364302 - 1364931 | 21509.3 |
| cytochrome b/b6 domain-containing protein | EJD96_RS06350 | Not Available | + | 1364946 - 1365560 | 22456.0 |
| molybdopterin-dependent oxidoreductase | EJD96_RS06355 | Not Available | + | 1365557 - 1366342 | 29476.3 |
| c-type cytochrome | EJD96_RS06360 | Not Available | - | 1366364 - 1369288 | 102907.0 |
| (2fe-2s)-binding protein | EJD96_RS06365 | Not Available | - | 1369285 - 1369767 | 17228.9 |
| asp/glu racemase | EJD96_RS06370 | Not Available | + | 1370170 - 1370925 | 27278.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.