Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | EJD96_RS06170 | Not Available | + | 1315094 - 1315831 | 25407.8 |
| cupin domain-containing protein | EJD96_RS06175 | Not Available | + | 1315894 - 1316433 | 18711.5 |
| tonb-dependent receptor family protein | EJD96_RS06180 | Not Available | + | 1316660 - 1318771 | 76793.4 |
| porin | EJD96_RS06185 | Not Available | - | 1318824 - 1319933 | 38533.6 |
| mfs transporter | EJD96_RS06190 | Not Available | - | 1320131 - 1321567 | 51818.0 |
| dihydrodipicolinate synthase family protein | EJD96_RS06195 | Not Available | - | 1321736 - 1322653 | 33139.2 |
| lysr family transcriptional regulator | EJD96_RS06200 | Not Available | + | 1322856 - 1323767 | 33362.4 |
| fecr domain-containing protein | EJD96_RS06205 | Not Available | + | 1324023 - 1324472 | 15993.2 |
| ompa family protein | EJD96_RS06210 | Not Available | + | 1324465 - 1325055 | 21069.4 |
| methyl-accepting chemotaxis protein | EJD96_RS06215 | Not Available | - | 1325143 - 1326861 | 60461.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.