Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa transferase | EJD96_RS06120 | Not Available | - | 1305122 - 1306531 | 50306.4 |
| citrate synthase family protein | EJD96_RS06125 | Not Available | + | 1306635 - 1307930 | 46603.5 |
| eama family transporter | EJD96_RS06130 | Not Available | + | 1307976 - 1308398 | 14839.6 |
| cmcj/nvfi family oxidoreductase | EJD96_RS06135 | Not Available | + | 1308579 - 1309454 | 32245.9 |
| 2-hydroxychromene-2-carboxylate isomerase | EJD96_RS06140 | Not Available | + | 1309451 - 1310080 | 23741.3 |
| lysr family transcriptional regulator | EJD96_RS06145 | Not Available | - | 1310070 - 1311005 | 34329.0 |
| mfs transporter | EJD96_RS06150 | Not Available | + | 1311197 - 1312417 | 42292.0 |
| nudix hydrolase | EJD96_RS06155 | Not Available | + | 1312435 - 1312926 | 17527.7 |
| lipocalin-like domain-containing protein | EJD96_RS06160 | Not Available | + | 1312923 - 1313441 | 18734.3 |
| plp-dependent aminotransferase family protein | EJD96_RS06165 | Not Available | - | 1313487 - 1314914 | 52195.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.