Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | EJD96_RS05970 | Not Available | + | 1267670 - 1268614 | 34726.7 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EJD96_RS05975 | Not Available | + | 1268730 - 1269587 | 30681.8 |
| dmt family transporter | EJD96_RS05980 | Not Available | - | 1269600 - 1270538 | 33491.6 |
| duf4337 domain-containing protein | EJD96_RS05985 | Not Available | - | 1270749 - 1271309 | 19942.1 |
| catalase/peroxidase hpi | EJD96_RS05990 | Not Available | + | 1271858 - 1274104 | 81196.4 |
| phosphonate degradation hd-domain oxygenase | EJD96_RS05995 | Not Available | + | 1274284 - 1274862 | 20825.5 |
| helix-turn-helix transcriptional regulator | EJD96_RS06000 | Not Available | - | 1274850 - 1275617 | 27980.9 |
| dna/rna non-specific endonuclease | EJD96_RS06005 | Not Available | - | 1275661 - 1277760 | 76157.4 |
| 3-hydroxybutyrate dehydrogenase | EJD96_RS06010 | Not Available | - | 1277943 - 1278725 | 27528.6 |
| gnat family n-acetyltransferase | EJD96_RS06015 | Not Available | + | 1279209 - 1279976 | 28703.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.