Herbaspirillum seropedicae str. AU13965

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum seropedicae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum seropedicae str. AU13965

Accession NumberNZ_CP034395.1

Gene Summary

Adenine Count

988071 bp

Thymine Count

984583 bp

Guanine Count

1688182 bp

Cytosine Count

1689162 bp

Genome Length

5349998 bp

Protein-coding Genes

4674 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna guanosine(34) transglycosylase tgtEJD96_RS05920Not Available+1255132 - 125626242407.0
hybrid sensor histidine kinase/response regulatorEJD96_RS05925Not Available-1256285 - 125809965257.4
response regulator transcription factorEJD96_RS05930Not Available-1258104 - 125871821899.4
hdod domain-containing proteinEJD96_RS05935Not Available-1258880 - 125983334032.4
hd domain-containing phosphohydrolaseEJD96_RS05940Not Available-1259834 - 126087138825.9
atp-binding proteinEJD96_RS05945Not Available-1260877 - 126304877939.4
hypothetical proteinEJD96_RS05950Not Available+1263473 - 12637158485.57
chromate efflux transporterEJD96_RS05955Not Available-1263712 - 126495342997.8
preprotein translocase subunit yajcEJD96_RS05960Not Available+1265237 - 126551510016.8
protein translocase subunit secdEJD96_RS05965Not Available+1265682 - 126758668347.1

Displaying genes 1161 – 1170 of 4765 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites