Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | EJD96_RS05765 | Not Available | + | 1231136 - 1231306 | 5963.96 |
| hypothetical protein | EJD96_RS05770 | Not Available | + | 1231523 - 1231837 | 11488.7 |
| osmotically-inducible lipoprotein osmb | EJD96_RS05775 | Not Available | + | 1231899 - 1232114 | 6670.17 |
| hypothetical protein | EJD96_RS05780 | Not Available | - | 1232259 - 1232591 | 11933.9 |
| duf3309 family protein | EJD96_RS05785 | Not Available | - | 1232748 - 1232906 | 5544.39 |
| cmpa/nrta family abc transporter substrate-binding protein | EJD96_RS05790 | Not Available | + | 1233395 - 1234693 | 47372.1 |
| nitrate abc transporter permease | EJD96_RS05795 | Not Available | + | 1234775 - 1235698 | 32960.2 |
| abc transporter atp-binding protein | EJD96_RS05800 | Not Available | + | 1235713 - 1236525 | 29643.2 |
| methyl-accepting chemotaxis protein | EJD96_RS05805 | Not Available | + | 1236583 - 1237272 | 24284.2 |
| duf423 domain-containing protein | EJD96_RS05810 | Not Available | - | 1237279 - 1237659 | 13303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.