Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | EJD96_RS05670 | Not Available | - | 1215922 - 1216089 | 6356.75 |
| 50s ribosomal protein l28 | EJD96_RS05675 | Not Available | - | 1216114 - 1216350 | 8756.73 |
| radc family protein | EJD96_RS05680 | Not Available | - | 1216557 - 1217231 | 24866.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EJD96_RS05685 | Not Available | + | 1217438 - 1217893 | 16418.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EJD96_RS05690 | Not Available | + | 1217965 - 1218936 | 34789.0 |
| branched-chain amino acid abc transporter permease | EJD96_RS05695 | Not Available | + | 1219503 - 1220432 | 32248.2 |
| abc transporter permease subunit | EJD96_RS05700 | Not Available | + | 1220486 - 1221700 | 43268.1 |
| abc transporter atp-binding protein | EJD96_RS05705 | Not Available | + | 1221716 - 1222483 | 27837.9 |
| abc transporter atp-binding protein | EJD96_RS05710 | Not Available | + | 1222499 - 1223224 | 25959.9 |
| pa2169 family four-helix-bundle protein | EJD96_RS05715 | Not Available | - | 1223357 - 1223821 | 17271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.