Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | EJD96_RS05620 | Not Available | + | 1205046 - 1207088 | 69777.8 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS05625 | Not Available | + | 1207286 - 1208044 | 26259.1 |
| patatin-like phospholipase family protein | EJD96_RS05630 | Not Available | + | 1208105 - 1209310 | 43408.3 |
| ribonuclease domain-containing protein | EJD96_RS05635 | Not Available | + | 1209424 - 1209819 | 15010.0 |
| barstar family protein | EJD96_RS05640 | Not Available | + | 1209942 - 1210340 | 15290.3 |
| phosphoribosylglycinamide formyltransferase | EJD96_RS05645 | Not Available | + | 1210464 - 1211075 | 22272.8 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EJD96_RS05650 | Not Available | + | 1211127 - 1212386 | 45916.9 |
| phospholipase d family protein | EJD96_RS05655 | Not Available | + | 1212383 - 1212967 | 21183.6 |
| mechanosensitive ion channel family protein | EJD96_RS05660 | Not Available | + | 1213005 - 1214363 | 49674.7 |
| acyl-coa desaturase | EJD96_RS05665 | Not Available | + | 1214446 - 1215642 | 45898.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.