Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deda family protein/thiosulfate sulfurtransferase glpe | EJD96_RS05570 | Not Available | + | 1196684 - 1197607 | 33569.1 |
| osmc family protein | EJD96_RS05575 | Not Available | - | 1197589 - 1197975 | 13846.4 |
| superoxide dismutase | EJD96_RS05580 | Not Available | - | 1198136 - 1198714 | 21350.9 |
| exodeoxyribonuclease vii large subunit | EJD96_RS05585 | Not Available | - | 1199040 - 1200437 | 51199.5 |
| mota/tolq/exbb proton channel family protein | EJD96_RS05590 | Not Available | + | 1200601 - 1201206 | 21889.1 |
| exbd/tolr family protein | EJD96_RS05595 | Not Available | + | 1201222 - 1201650 | 15529.9 |
| tetraacyldisaccharide 4'-kinase | EJD96_RS05600 | Not Available | + | 1201766 - 1202803 | 36350.2 |
| trm112 family protein | EJD96_RS05605 | Not Available | + | 1202784 - 1202963 | 6514.05 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EJD96_RS05610 | Not Available | + | 1202979 - 1203794 | 29071.8 |
| adenylate kinase | EJD96_RS05615 | Not Available | + | 1204074 - 1204730 | 23500.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.