Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| basic amino acid abc transporter substrate-binding protein | EJD96_RS00640 | Not Available | + | 81309 - 82088 | 28019.0 |
| amino acid abc transporter permease | EJD96_RS00645 | Not Available | + | 82235 - 82987 | 27740.2 |
| amino acid abc transporter atp-binding protein | EJD96_RS00650 | Not Available | + | 82993 - 83715 | 26860.2 |
| dmt family transporter | EJD96_RS00655 | Not Available | - | 83776 - 84621 | 29851.3 |
| trna (guanine(46)-n(7))-methyltransferase trmb | EJD96_RS00660 | Not Available | - | 84618 - 85295 | 25160.9 |
| duf3567 domain-containing protein | EJD96_RS00665 | Not Available | - | 85423 - 85680 | 9893.64 |
| response regulator | EJD96_RS00670 | Not Available | - | 86100 - 86849 | 27112.5 |
| sensor histidine kinase | EJD96_RS00675 | Not Available | - | 86984 - 89266 | 82602.8 |
| duf4390 domain-containing protein | EJD96_RS00680 | Not Available | - | 89263 - 89901 | 24348.7 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EJD96_RS00685 | Not Available | - | 89898 - 91217 | 47778.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.