Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s1c family serine protease | EJD96_RS05520 | Not Available | + | 1176222 - 1177640 | 50063.4 |
| tolc family protein | EJD96_RS05525 | Not Available | - | 1177671 - 1179122 | 51488.2 |
| hlyd family type i secretion periplasmic adaptor subunit | EJD96_RS05530 | Not Available | - | 1179112 - 1180455 | 49474.4 |
| type i secretion system permease/atpase | EJD96_RS05535 | Not Available | - | 1180452 - 1182650 | 80134.2 |
| s8 family serine peptidase | EJD96_RS05540 | Not Available | - | 1182788 - 1190542 | 265497.0 |
| hypothetical protein | EJD96_RS05545 | Not Available | - | 1190544 - 1191815 | 47602.7 |
| hypothetical protein | EJD96_RS05550 | Not Available | - | 1191910 - 1192185 | 10705.0 |
| laci family dna-binding transcriptional regulator | EJD96_RS05555 | Not Available | + | 1192390 - 1193496 | 39528.7 |
| glucarate dehydratase | EJD96_RS05560 | Not Available | + | 1193687 - 1195054 | 49644.4 |
| mfs transporter | EJD96_RS05565 | Not Available | + | 1195166 - 1196509 | 48068.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.