Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | EJD96_RS05420 | Not Available | + | 1150689 - 1151423 | 25710.9 |
| nad(p)/fad-dependent oxidoreductase | EJD96_RS05425 | Not Available | + | 1151425 - 1152750 | 46949.0 |
| lysr family transcriptional regulator | EJD96_RS05430 | Not Available | - | 1152757 - 1153701 | 34372.3 |
| rida family protein | EJD96_RS05435 | Not Available | + | 1153830 - 1154246 | 14425.1 |
| aldehyde dehydrogenase family protein | EJD96_RS05440 | Not Available | + | 1154302 - 1155762 | 51441.8 |
| m20 aminoacylase family protein | EJD96_RS05445 | Not Available | + | 1155800 - 1157011 | 43905.4 |
| dsd1 family plp-dependent enzyme | EJD96_RS05450 | Not Available | - | 1156998 - 1158128 | 40370.4 |
| methyl-accepting chemotaxis protein | EJD96_RS05455 | Not Available | - | 1158252 - 1159799 | 55130.6 |
| glucarate dehydratase family protein | EJD96_RS05460 | Not Available | - | 1160181 - 1161455 | 46561.8 |
| mfs transporter | EJD96_RS05465 | Not Available | - | 1161498 - 1162826 | 47392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.