Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EJD96_RS05370 | Not Available | - | 1137511 - 1138413 | 32975.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | EJD96_RS05375 | Not Available | - | 1138463 - 1139944 | 51713.6 |
| nad(p)/fad-dependent oxidoreductase | EJD96_RS05380 | Not Available | - | 1140020 - 1141312 | 47326.8 |
| 2-hydroxyacid dehydrogenase | EJD96_RS05385 | Not Available | - | 1141528 - 1142454 | 33707.8 |
| gnat family n-acetyltransferase | EJD96_RS05390 | Not Available | - | 1142475 - 1143362 | 31875.4 |
| haloacid dehalogenase type ii | EJD96_RS05395 | Not Available | + | 1143999 - 1144667 | 25155.0 |
| abc transporter substrate-binding protein | EJD96_RS05400 | Not Available | + | 1144810 - 1146432 | 58970.8 |
| abc transporter permease | EJD96_RS05405 | Not Available | + | 1146694 - 1147650 | 33764.7 |
| abc transporter permease | EJD96_RS05410 | Not Available | + | 1147647 - 1148528 | 30966.4 |
| abc transporter atp-binding protein | EJD96_RS05415 | Not Available | + | 1148533 - 1150470 | 68909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.