Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJD96_RS05320 | Not Available | - | 1124133 - 1125053 | 34293.4 |
| mfs transporter | EJD96_RS05325 | Not Available | + | 1125258 - 1126601 | 47151.1 |
| homogentisate 1,2-dioxygenase | EJD96_RS05330 | Not Available | + | 1126598 - 1127935 | 49347.2 |
| fumarylacetoacetase | EJD96_RS05335 | Not Available | + | 1127932 - 1129278 | 48154.9 |
| maleylacetoacetate isomerase | EJD96_RS05340 | Not Available | + | 1129314 - 1129961 | 23984.9 |
| maoc family dehydratase | EJD96_RS05345 | Not Available | - | 1129977 - 1130432 | 16783.0 |
| flagellar filament capping protein flid | EJD96_RS05350 | Not Available | - | 1130633 - 1132687 | 70820.4 |
| flagellar filament capping protein flid | EJD96_RS05355 | Not Available | - | 1132953 - 1134983 | 68702.1 |
| lrp/asnc family transcriptional regulator | EJD96_RS05360 | Not Available | - | 1135317 - 1135811 | 18997.2 |
| aspartate aminotransferase family protein | EJD96_RS05365 | Not Available | - | 1135955 - 1137331 | 49804.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.