Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase catalytic domain-containing protein | EJD96_RS05170 | Not Available | - | 1090078 - 1091166 | 39672.9 |
| dihydroxyacetone kinase subunit dhal | EJD96_RS05175 | Not Available | - | 1091189 - 1091839 | 22579.3 |
| dihydroxyacetone kinase subunit dhak | EJD96_RS05180 | Not Available | - | 1091836 - 1092849 | 35213.8 |
| gold/dthd family dehydrogenase | EJD96_RS05185 | Not Available | - | 1092896 - 1093672 | 26716.3 |
| substrate-binding domain-containing protein | EJD96_RS05190 | Not Available | - | 1093669 - 1094661 | 35190.6 |
| abc transporter permease | EJD96_RS05195 | Not Available | - | 1094693 - 1095679 | 33281.4 |
| sugar abc transporter atp-binding protein | EJD96_RS05200 | Not Available | - | 1095746 - 1097224 | 53650.1 |
| ribose 5-phosphate isomerase b | EJD96_RS05205 | Not Available | + | 1097521 - 1097982 | 16412.7 |
| sugar-binding transcriptional regulator | EJD96_RS05210 | Not Available | + | 1098054 - 1099013 | 34936.8 |
| transaldolase | EJD96_RS05215 | Not Available | - | 1099139 - 1100074 | 34201.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.