Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJD96_RS00590 | Not Available | + | 72058 - 72414 | 13188.1 |
| type ii toxin-antitoxin system vapc family toxin | EJD96_RS00595 | Not Available | - | 72513 - 72878 | 13817.8 |
| ribbon-helix-helix protein, copg family | EJD96_RS00600 | Not Available | - | 72872 - 73090 | 8359.12 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EJD96_RS00605 | Not Available | + | 73233 - 73805 | 21174.3 |
| abc transporter permease | EJD96_RS00610 | Not Available | - | 73824 - 74690 | 31694.5 |
| abc transporter atp-binding protein | EJD96_RS00615 | Not Available | - | 74706 - 75578 | 31876.4 |
| abc transporter substrate-binding protein | EJD96_RS00620 | Not Available | - | 75614 - 76648 | 37427.0 |
| potassium transporter kup | EJD96_RS00625 | Not Available | + | 77077 - 78978 | 69504.8 |
| ornithine cyclodeaminase | EJD96_RS00630 | Not Available | + | 79155 - 80198 | 37605.3 |
| arginase | EJD96_RS00635 | Not Available | + | 80210 - 81118 | 32024.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.