Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AG215
Accession NumberSOSE00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_5151 | Not Available | + | 5697239 - 5699275 | 72756.1 |
| ferredoxin | DFO49_5152 | Not Available | - | 5700105 - 5700407 | 10865.2 |
| lysr family transcriptional regulator | DFO49_5153 | Not Available | - | 5700857 - 5701741 | 32164.9 |
| methylmalonate-semialdehyde dehydrogenase | DFO49_5154 | Not Available | + | 5702035 - 5703546 | 53750.7 |
| choline dehydrogenase | DFO49_5155 | Not Available | + | 5703627 - 5705246 | 58780.2 |
| amino acid/amide abc transporter atp-binding protein 1 (haat family) | DFO49_5156 | Not Available | + | 5705410 - 5706228 | 29780.1 |
| amino acid/amide abc transporter atp-binding protein 2 (haat family) | DFO49_5157 | Not Available | + | 5706228 - 5706986 | 27559.5 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFO49_5158 | Not Available | + | 5707171 - 5708379 | 42971.9 |
| amino acid/amide abc transporter membrane protein 1 (haat family) | DFO49_5159 | Not Available | + | 5708520 - 5709404 | 31724.5 |
| amino acid/amide abc transporter membrane protein 2 (haat family) | DFO49_5160 | Not Available | + | 5709417 - 5710397 | 34403.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.