Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AG215
Accession NumberSOSE00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | DFO49_0261 | Not Available | - | 280640 - 281431 | 28254.0 |
| xylose abc transporter membrane protein | DFO49_0262 | Not Available | - | 281508 - 282641 | 39417.9 |
| xylose abc transporter atp-binding protein | DFO49_0263 | Not Available | - | 282724 - 284280 | 56252.8 |
| xylose-binding protein | DFO49_0264 | Not Available | - | 284389 - 285405 | 36729.4 |
| arac family transcriptional regulator | DFO49_0265 | Not Available | + | 285730 - 286995 | 46606.9 |
| aldose 1-epimerase | DFO49_0266 | Not Available | + | 286992 - 288056 | 39186.8 |
| hypothetical protein | DFO49_0267 | Not Available | + | 288300 - 288728 | 16773.1 |
| uncharacterized protein duf2442 | DFO49_0268 | Not Available | + | 288725 - 289174 | 16095.4 |
| isoquinoline 1-oxidoreductase alpha subunit | DFO49_0269 | Not Available | + | 289423 - 290037 | 20766.2 |
| isoquinoline 1-oxidoreductase beta subunit | DFO49_0270 | Not Available | + | 290034 - 292286 | 81338.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.