Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | SAMN04488494_1316 | Not Available | + | 1032305 - 1033345 | 39069.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN04488494_1317 | Not Available | + | 1033332 - 1035023 | 62899.4 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN04488494_1318 | Not Available | + | 1034992 - 1035843 | 31787.7 |
| o-succinylbenzoate synthase | SAMN04488494_1319 | Not Available | + | 1035919 - 1036935 | 38599.7 |
| o-succinylbenzoic acid--coa ligase | SAMN04488494_1320 | Not Available | + | 1036923 - 1037918 | 37493.7 |
| 3-dehydroquinate synthase | SAMN04488494_1321 | Not Available | - | 1038011 - 1039060 | 38479.4 |
| carboxypepd_reg-like domain-containing protein | SAMN04488494_1322 | Not Available | + | 1039217 - 1042177 | 109219.0 |
| nucleotidyl transferase | SAMN04488494_1323 | Not Available | + | 1042281 - 1043012 | 27342.3 |
| gmp synthase (glutamine-hydrolysing) | SAMN04488494_1324 | Not Available | + | 1043054 - 1044658 | 59341.3 |
| large conductance mechanosensitive channel | SAMN04488494_1325 | Not Available | - | 1044710 - 1045105 | 14211.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.