Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase beta chain | SAMN04488494_1049 | Not Available | + | 747197 - 748558 | 49864.7 |
| hypothetical protein | SAMN04488494_1050 | Not Available | - | 748617 - 749399 | 28624.6 |
| protein of unknown function | SAMN04488494_1051 | Not Available | - | 749577 - 750038 | 17558.3 |
| rna polymerase rpb6 | SAMN04488494_1052 | Not Available | - | 750040 - 750378 | 13156.3 |
| beta-barrel assembly machine subunit bamd | SAMN04488494_1053 | Not Available | - | 750382 - 751209 | 31490.1 |
| excinuclease abc subunit b | SAMN04488494_1054 | Not Available | + | 751319 - 753358 | 77736.7 |
| protein of unknown function | SAMN04488494_1055 | Not Available | + | 753463 - 754080 | 23658.6 |
| hypothetical protein | SAMN04488494_1056 | Not Available | + | 754085 - 754249 | 6320.15 |
| putative porin | SAMN04488494_1057 | Not Available | + | 754253 - 756583 | 89554.9 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN04488494_1058 | Not Available | - | 756580 - 757494 | 33439.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.